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Atkinson, Jonathan A., Pound, Michael P., Bennett, Malcolm J. and Wells, Darren M. (2019) Uncovering the hidden half of plants using new advances in root phenotyping. Current Opinion in Biotechnology, 55 . pp. 1-8. ISSN 1879-0429

Pridmore, Tony P., Gibbs, Jonathon, Pound, Michael P., French, Andrew P., Wells, Darren M. and Murchie, Erik H. (2018) Plant phenotyping: an active vision cell for three-dimensional plant shoot reconstruction. Plant Physiology . ISSN 1532-2548 (In Press)

Pound, Michael P., Atkinson, Jonathan A., Townsend, Alexandra J., Wilson, Michael H., Griffiths, Marcus, Jackson, Aaron S., Bulat, Adrian, Tzimiropoulos, Georgios, Wells, Darren M., Murchie, Erik H., Pridmore, Tony P. and French, Andrew P. (2017) Deep machine learning provides state-of-the-art performance in image-based plant phenotyping. GigaScience, 6 (10). pp. 1-10. ISSN 2047-217X

Pound, Michael P., Fozard, Susan, Torres Torres, Mercedes, Forde, Brian G. and French, Andrew P. (2017) AutoRoot: open-source software employing a novel image analysis approach to support fully-automated plant phenotyping. Plant Methods, 13 (1). 12/1-12/10. ISSN 1746-4811

Burrell, Thomas, Fozard, Susan, Holroyd, Geoff H., French, Andrew P., Pound, Michael P., Bigley, Christopher J., Taylor, C. James and Forde, Brian G. (2017) The Microphenotron: a robotic miniaturized plant phenotyping platform with diverse applications in chemical biology. Plant Methods, 13 (10). pp. 1-20. ISSN 1746-4811

Burgess, Alexandra J., Retkute, Renata, Pound, Michael P., Mayes, Sean and Murchie, Erik H. (2017) Image-based 3D canopy reconstruction to determine potential productivity in complex multi-species crop systems. Annals of Botany, 119 (4). pp. 517-532. ISSN 1095-8290

Burgess, Alexandra J., Retkute, Renata, Preston, Simon P., Jensen, Oliver E., Pound, Michael P., Pridmore, Tony P. and Murchie, Erik H. (2016) The 4-dimensional plant: effects of wind-induced canopy movement on light fluctuations and photosynthesis. Frontiers in Plant Science, 7 (1392). ISSN 1664-462X

Gibbs, Jonathon, Pound, Michael P., French, Andrew P., Wells, Darren M., Murchie, Erik H. and Pridmore, Tony P. (2016) Approaches to three-dimensional reconstruction of plant shoot topology and geometry. Functional Plant Biology . ISSN 1445-4408

Pound, Michael P., French, Andrew P., Fozard, John A., Murchie, Erik H. and Pridmore, Tony P. (2016) A patch-based approach to 3D plant shoot phenotyping. Machine Vision and Applications . ISSN 1432-1769

Atkinson, Jonathan A., Wingen, Luzie U., Griffiths, Marcus, Pound, Michael P., Gaju, Oorbessy, Foulkes, John, Le Gouis, Jacques, Griffiths, Simon, Bennett, Malcolm J., King, Julie and Wells, Darren M. (2015) Phenotyping pipeline reveals major seedling root growth QTL in hexaploid wheat. Journal of Experimental Botany, 66 (8). pp. 2283-2292. ISSN 1460-2431

Lobet, Guillaume, Pound, Michael P., Diener, Julian, Pradal, Christophe, Draye, Xavier, Godin, Christophe, Javaux, Mathieu, Leitner, Daniel, Meunier, Felicien, Nacry, Philippe, Pridmore, Tony P. and Schnepf, Andrea (2015) Root system markup language: toward an unified root architecture description language. Plant Physiology, 167 (3). pp. 617-627. ISSN 1532-2548

Burgess, Alexandra J., Retkute, Renata, Pound, Michael P., Foulkes, John, Preston, Simon P., Jensen, Oliver E., Pridmore, Tony P. and Murchie, Erik H. (2015) High-resolution three-dimensional structural data quantify the impact of photoinhibition on long-term carbon gain in wheat canopies in the field. Plant Physiology, 169 (2). pp. 1192-1204. ISSN 1532-2548

Pound, Michael P., French, Andrew P., Murchie, Erik H. and Pridmore, Tony P. (2014) Automated recovery of 3D models of plant shoots from multiple colour images. Plant Physiology, 166 (4). pp. 1688-1698. ISSN 0032-0889

Band, Leah R., Wells, Darren M., Fozard, John A., Ghetiu, Teodor, French, Andrew P., Pound, Michael P., Wilson, Michael H., Yu, Lei, Li, Wenda, Hijazi, Hussein I., Oh, Jaesung, Pearce, Simon P., Perez-Amador, Miguel A., Yun, Jeonga, Kramer, Eric, Alonso, Jose M., Godin, Christophe, Vernoux, Teva, Hodgman, T. C., Pridmore, Tony P., Swarup, Ranjan, King, John R. and Bennett, Malcolm J. (2014) Systems analysis of auxin transport in the Arabidopsis root apex. Plant Cell, 26 (3). pp. 862-875. ISSN 1040-4651

Conference or Workshop Item

Pound, Michael P., Atkinson, Jonathan A., Wells, Darren M., Pridmore, Tony P. and French, Andrew P. (2017) Deep learning for multi-task plant phenotyping. In: ICCV 2017 International Conference on Computer Vision, 22-29 October, 2017, Venice, Italy.

Gibbs, Jonathon, Pound, Michael P., Wells, Darren M., Murchie, Erik H., French, Andrew P. and Pridmore, Tony P. (2015) Three-dimensional reconstruction of plant shoots from multiple images using an active vision system. In: Agri-Food Robotics Workshop, 2 Oct 2015, Hamburg, Germany.

Other

Pound, Michael P., Burgess, Alexandra J., Wilson, Michael H., Atkinson, Jonathan A., Griffiths, Marcus, Jackson, Aaron S., Bulat, Adrian, Tzimiropoulos, Yorgos, Wells, Darren M., Murchie, Erik H., Pridmore, Tony P. and French, Andrew P. (2016) Deep machine learning provides state-of-the art performance in image-based plant phenotyping. Cold Spring Harbor Laboratory.