• Login
• Admin

2018

Bacq-Labreuil, Aurelie, Crawford, John, Mooney, Sacha J., Neal, Andrew L., Akkari, Elsy, McAuliffe, Cormac, Zhang, Xiaoxian, Redmile-Gordon, Marc and Ritz, Karl (2018) Effects of cropping systems upon the three-dimensional architecture of soil systems are modulated by texture. Geoderma, 332 . pp. 73-83. ISSN 0016-7061

Mathers, Andrew M, Hepworth, Christopher, Baillie, Alice, Sloan, Jen, Jones, Hannah, Lundgren, Marjorie, Fleming, Andrew, Mooney, Sacha J. and Sturrock, Craig (2018) Investigating the microstructure of plant leaves in 3D with lab-based X-ray Computed Tomography. Plant Methods, 14 (1). ISSN 1746-4811

Fitters, Tamara F.J., Mooney, Sacha J. and Sparkes, Debbie L. (2018) Sugar beet root growth under different watering regimes: a minirhizotron study. Environmental and Experimental Botany, 155 . pp. 79-86. ISSN 0098-8472

Grayling, K.M., Young, Scott D., Roberts, Clive J., de Heer, Martine I., Shirley, I.M., Sturrock, Craig and Mooney, Sacha J. (2018) The application of X-ray micro Computed Tomography imaging for tracing particle movement in soil. Geoderma, 321 . pp. 8-14. ISSN 1872-6259

Fang, Huan, Zhou, Hu, Norton, Gareth J., Price, Adam H., Raffan, Annette C., Mooney, Sacha J., Peng, Xinhua and Hallett, Paul D. (2018) Interaction between contrasting rice genotypes and soil physical conditions induced by hydraulic stresses typical of alternate wetting and drying irrigation of soil. Plant and Soil . ISSN 1573-5036

Blunk, Sebastian, De Heer, Martin I., Sturrock, Craig and Mooney, Sacha J. (2018) Soil seedbed engineering and its impact on germination and establishment in sugar beet (Beta vulgaris L.) as affected by seed-soil contact. Seed Science Research . ISSN 1475-2735

Giri, Jitender, Bhosale, Rahul, Huang, Guoqiang, Pandey, Bipin K., Parker, Helen, Zappala, Susan, Yang, Jing, Dievart, Anne, Bureau, Charlotte, Ljung, Karin, Price, Adam, Rose, Terry, Larrieu, Antoine, Mairhofer, Stefan, Sturrock, Craig J., White, Philip, Dupuy, Lionel, Hawkesford, Malcolm, Perin, Christophe, Liang, Wanqi, Peret, Benjamin, Hodgman, Charlie T., Lynch, Jonathan, Wissuwa, Matthias, Zhang, Dabing, Pridmore, Tony, Mooney, Sacha J., Guiderdoni, Emmanuel, Swarup, Ranjan and Bennett, Malcolm J. (2018) Rice auxin influx carrier OsAUX1 facilitates root hair elongation in response to low external phosphate. Nature Communications, 9 (1). 1408/1-1408/7. ISSN 2041-1723

Garbout, Amin, Sturrock, Craig J., Armenise, Elena, Ahn, Sujung, Simmons, Robert W., Doerr, Stefan, Ritz, Karl and Mooney, Sacha J. (2018) TopCap: a tool to quantify soil surface topology and subsurface structure. Vadose Zone Journal, 17 (1). p. 170091. ISSN 1539-1663

Armenise, Elena, Simmons, Robert W., Ahn, Sujung, Garbout, Amin, Doen, Stefan H., Mooney, Sacha J., Sturrock, Craig and Ritz, Karl (2018) Soil seal development under simulated rainfall: structural, physical and hydrological dynamics. Journal of Hydrology, 556 . pp. 211-219. ISSN 1879-2707

2017

Daly, Keith R., Tracy, Saoirse R., Crout, Neil M.J., Mairhofer, Stefan, Pridmore, Tony P., Mooney, Sacha J. and Roose, Tiina (2017) Quantification of root water uptake in soil using X-ray Computed Tomography and image based modelling. Plant, Cell and Environment, 41 (1). pp. 121-133. ISSN 1365-3040

Fitters, Tamara F.J., Bussell, Jennifer S., Mooney, Sacha J. and Sparkes, Debbie L. (2017) Assessing water uptake in sugar beet (Beta vulgaris) under different watering regimes. Environmental and Experimental Botany, 144 . pp. 61-67. ISSN 0098-8472

Lehmeier, Christoph, Pajor, Radoslaw, Lundgren, Marjorie R., Mathers, Andrew, Sloan, Jen, Bauch, Marion, Mitchell, Alice, Bellasio, Chandra, Green, Adam, Bouyer, Daniel, Schnittger, Arp, Sturrock, Craig, Osborne, Colin P., Rolfe, Stephen, Mooney, Sacha J. and Fleming, Andrew J. (2017) Cell density and airspace patterning in the leaf can be manipulated to increase leaf photosynthetic capacity. The Plant Journal, 92 (6). pp. 981-994. ISSN 1365-313X

Zhou, Hu, Mooney, Sacha J. and Peng, Xinhua (2017) Bimodal soil pore structure investigated by a combined soil water retention curve and X-ray Computed Tomography approach. Soil Science Society of America Journal, 81 (6). pp. 1270-1278. ISSN 1435-0661

Helliwell, J.R., Sturrock, Craig J., Mairhofer, Stefan, Craigon, Jim, Ashton, R.W., Miller, A.J., Whalley, W.R. and Mooney, Sacha J. (2017) The emergent rhizosphere: imaging the development of the porous architecture at the root-soil interface. Scientific Reports, 7 (14875). pp. 1-10. ISSN 2045-2322

Morris, Emily C., Griffiths, Marcus, Golebiowska, Agata, Mairhofer, Stefan, Burr-Hersey, Jasmine, Goh, Tatsuaki, von Wangenheim, Daniel, Atkinson, Brian, Sturrock, Craig J., Lynch, Jonathan P., Vissenberg, Kris, Ritz, Karl, Wells, Darren M., Mooney, Sacha J. and Bennett, Malcolm J. (2017) Shaping 3D root system architecture. Current Biology, 27 (17). R919-R930. ISSN 1879-0445

Blunk, Sebastian, Malik, Ali Hafeez, de Heer, Martine I., Ekblad, Tobias, Bussell, Jennifer S., Sparkes, Debbie L., Fredlund, Kenneth, Sturrock, Craig J. and Mooney, Sacha J. (2017) Quantification of seed–soil contact of sugar beet (Beta vulgaris) using X-ray Computed Tomography. Plant Methods, 13 (71). ISSN 1746-4811

Burr-Hersey, Jasmine E., Mooney, Sacha J., Bengough, A. Glyn, Mairhofer, Stefan and Ritz, Karl (2017) Developmental morphology of cover crop species exhibit contrasting behaviour to changes in soil bulk density, revealed by X-ray computed tomography. PLOS ONE, 12 (7). e0181872/1-e0181872/18. ISSN 1932-6203

Mooney, Sacha J. (2017) Inorganic fertilization effects on the structure of a calcareous silt loam soil. Agronomy Journal . ISSN 1435-0645 (In Press)

Blunk, Sebastian, Malik, Ali Hafeez, de Heer, Martine I., Ekblad, Tobias, Fredlund, Kenneth, Mooney, Sacha J. and Sturrock, Craig J. (2017) Quantification of differences in germination behaviour of pelleted and coated sugar beet seeds using X-ray Computed Tomography (X-ray CT). Biomedical Physics & Engineering Express, 3 (4). pp. 1-11. ISSN 2057-1976

Dietrich, Daniela, Pang, Lei, Kobayashi, Akie, Fozard, John A., Boudolf, Véronique, Bhosale, Rahul, Antoni, Regina, Nguyen, Tuan, Hiratsuka, Sotaro, Fujii, Nobuharu, Miyazawa, Yutaka, Bae, Tae-Woong, Wells, Darren M., Owen, Markus R., Band, Leah R., Dyson, Rosemary J., Jensen, Oliver E., King, John R., Tracy, Saoirse R., Sturrock, Craig, Mooney, Sacha J., Roberts, Jeremy A., Bhalerao, Rishikesh P., Dinneny, José R., Rodriguez, Pedro L., Nagatani, Akira, Hosokawa, Yoichiroh, Baskin, Tobias I., Pridmore, Tony P., De Veylder, Lieven, Takahashi, Hideyuki and Bennett, Malcolm J. (2017) Root hydrotropism is controlled via a cortex-specific growth mechanism. Nature Plants, 3 . p. 17057. ISSN 2055-0278

2016

Carmeis Filho, Antonio C.A., Crusciol, Carlos A. C., Guimarães, Tiara M., Calonego, Juliano C. and Mooney, Sacha J. (2016) Impact of amendments on the physical properties of soil under tropical long-term no till conditions. PLoS ONE, 11 (12). e0167564. ISSN 1932-6203

York, Larry M., Carminati, Andrea, Mooney, Sacha J., Ritz, Karl and Bennett, Malcolm J. (2016) The holistic rhizosphere: integrating zones, processes, and semantics in the soil influenced by roots. Journal of Experimental Botany, 67 (12). pp. 3629-3643. ISSN 1460-2431

Lazarević, Boris, Sturrock, Craig, Poljak, Milan and Mooney, Sacha J. (2016) Quantification of aluminum-induced changes in wheat root architecture by X-ray microcomputed tomography. Communications in Soil Science and Plant Analysis, 47 (2). pp. 263-274. ISSN 1532-2416

2015

Mairhofer, Stefan, Johnson, James, Sturrock, Craig, Bennett, Malcolm J., Mooney, Sacha J. and Pridmore, Tony P. (2015) Visual tracking for the recovery of multiple interacting plant root systems from X-ray μCT images. Machine Vision and Applications . pp. 1-14. ISSN 1432-1769

Mairhofer, Stefan, Sturrock, Craig, Bennett, Malcolm J., Mooney, Sacha J. and Pridmore, Tony P. (2015) Extracting multiple interacting root systems using X-ray micro computed tomography. The Plant Journal, 84 (5). pp. 1034-1043. ISSN 1365-313X

Mangalassery, S., Sjögersten, Sofie, Sparkes, D.L. and Mooney, Sacha J. (2015) Examining the potential for climate change mitigation from zero tillage. Journal of Agricultural Science, 153 (7). pp. 1151-1173. ISSN 1469-5146

Sturrock, Craig, Woodhall, James, Brown, Matthew, Walker, Catherine, Mooney, Sacha J. and Ray, Rumiana V. (2015) Effects of damping-off caused by Rhizoctonia solani anastomosis group 2-1 on roots of wheat and oil seed rape quantified using X-ray computed tomography and real-time PCR. Frontiers in Plant Science, 6 . pp. 1-11. ISSN 1664-462X

Mangalassery, S., Mooney, Sacha J., Sparkes, D.L., Fraser, W.T. and Sjögersten, Sofie (2015) Impacts of zero tillage on soil enzyme activities, microbial characteristics and organic matter functional chemistry in temperate soils. European Journal of Soil Biology, 68 . pp. 9-17. ISSN 1164-5563

Daly, Keith R., Mooney, Sacha J., Bennett, Malcolm J., Crout, Neil M.J., Roose, Tiina and Tracy, Saoirse R. (2015) Assessing the influence of the rhizosphere on soil hydraulic properties using X-ray computed tomography and numerical modelling. Journal of Experimental Botany, 66 (8). pp. 2305-2314. ISSN 1460-2431

Tracy, Saoirse R., Daly, Keith R., Sturrock, Craig J., Crout, Neil M.J., Mooney, Sacha J. and Roose, Tiina (2015) Three-dimensional quantification of soil hydraulic properties using X-ray computed tomography and image-based modeling. Water Resources Research, 51 (2). pp. 1006-1022. ISSN 1944-7973

2014

Mairhofer, Stefan, Sturrock, Craig, Wells, Darren M., Bennett, Malcolm J., Mooney, Sacha J. and Pridmore, Tony (2014) On the evaluation of methods for the recovery of plant root systems from X-ray computed tomography images. Functional Plant Biology, 42 (5). pp. 460-470. ISSN 1445-4408

Atkinson, Jonathan A., Rasmussen, Amanda, Traini, Richard, Voss, Ute, Sturrock, Craig, Mooney, Sacha J., Wells, Darren M. and Bennett, Malcolm J. (2014) Branching out in roots: uncovering form, function, and regulation. Plant Physiology, 166 (2). pp. 538-550. ISSN 0032-0889

Mangalassery, S., Sjögersten, Sofie, Sparkes, Debbie L., Sturrock, Craig, Craigon, Jim and Mooney, Sacha J. (2014) To what extent can zero tillage lead to a reduction in greenhouse gas emissions from temperate soils? Scientific Reports, 4 . 4586 /1-4586 /8. ISSN 2045-2322

2013

Zappala, Susan, Helliwell, Jonathan R., Tracy, Saoirse, Mairhofer, Stefan, Sturrock, Craig, Pridmore, Tony, Bennett, Malcolm J. and Mooney, Sacha J. (2013) Effects of X-ray dose on rhizosphere studies using X-ray computed tomography. PLoS ONE, 8 (6). e67250/1-e67250/8. ISSN 1932-6203

Mairhofer, Stefan, Zappala, Susan, Tracy, Saoirse, Sturrock, Craig, Bennett, Malcolm J., Mooney, Sacha J. and Pridmore, Tony (2013) Recovering complete plant root system architectures from soil via X-ray μ-computed tomography. Plant Methods, 9 . 8/1-8/7. ISSN 1746-4811

2012

Yang, Ni, Fisk, Ian D., Linforth, Rob S.T., Brown, Keith, Walsh, Stuart, Mooney, Sacha J., Sturrock, Craig and Hort, Joanne (2012) Impact of flavour solvent on biscuit micro-structure as measured by X-ray micro-computed tomography and the distribution of vanillin and HMF (HPLC). European Food Research and Technology, 235 (6). pp. 1083-1091. ISSN 1438-2377