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Daly, Paul, van Munster, Jolanda M., Kokolski, Matthew, Sang, Fei, Blythe, Martin J., Malla, Sunir, Velasco de Castro Oliveira, Juliana, Goldman, Gustavo H. and Archer, David B. (2017) Transcriptomic responses of mixed cultures of ascomycete fungi to lignocellulose using dual RNA-seq reveal inter-species antagonism and limited beneficial effects on CAZyme expression. Fungal Genetics and Biology, 102 . pp. 4-21. ISSN 1096-0937

Wong, Quin, Tanzi, Alberto, Ho, Wai, Malla, Sunir, Blythe, Martin, Karunaratne, Asha, Massawe, Festo and Mayes, Sean (2017) Development of gene‐based SSR markers in winged bean (Psophocarpus tetragonolobus (L.) DC.) for diversity assessment. Genes, 8 (3). 100/1-100/12. ISSN 2073-4425

Loose, Matthew, Malla, Sunir and Stout, Michael (2016) Real-time selective sequencing using nanopore technology. Nature Methods, 13 (9). pp. 751-754. ISSN 1548-7105

Moreton, Joanna, Malla, Sunir, Aboobaker, Aziz, Tarlinton, Rachael E. and Emes, Richard D. (2014) Characterisation of the horse transcriptome from immunologically active tissues. PeerJ . ISSN 2167-8359

Müller, Carolin A., Hawkins, Michelle, Retkute, Renata, Malla, Sunir, Wilson, Ray, Blythe, Martin J., Nakato, Ryuichiro, Komata, Makiko, Shirahige, Katsuhiko, de Moura, Alessandro P.S. and Nieduszynski, Conrad A. (2014) The dynamics of genome replication using deep sequencing. Nucleic Acids Research, 42 (1). e3/1-e3/11. ISSN 0305-1048

Derecka, Kamila, Blythe, Martin J., Malla, Sunir, Genereux, Diane P., Guffanti, Alessandro, Pavan, Paolo, Moles, Anna, Snart, Charles, Ryder, Thomas, Ortori, Catharine A., Barrett, David A., Schuster, Eugene and Stöger, Reinhard (2013) Transient exposure to low levels of insecticide affects metabolic networks of honeybee larvae. PLoS ONE, 8 (7). e68191/1-e68191/11. ISSN 1932-6203

Delmas, Stéphane, Pullan, Steven T., Gaddipati, Sanyasi, Kokolski, Matthew, Malla, Sunir, Blythe, Martin J., Ibbett, Roger, Campbell, Maria, Liddell, Susan, Aboobaker, Aziz, Tucker, Gregory A. and Archer, David B. (2012) Uncovering the genome-wide transcriptional responses of the filamentous fungus Aspergillus niger to lignocellulose using RNA sequencing. PLoS Genetics, 8 (8). e1002875/1-e1002875/13. ISSN 1553-7390

Blythe, Martin J., Malla, Sunir, Everall, Richard, Shih, Yu-huan, Lemay, Virginie, Moreton, Joanna, Wilson, Raymond and Aboobaker, Aziz (2012) High through-put sequencing of the Parhyale hawaiensis mRNAs and microRNAs to aid comparative developmental studies. PLoS ONE, 7 (3). e33784/1-e33784/12. ISSN 1932-6203

Brown, Katherine, Moreton, Joanna, Malla, Sunir, Aboobaker, A. Aziz, Emes, Richard D. and Tarlinton, Rachael E. (2012) Characterisation of retroviruses in the horse genome and their transcriptional activity via transcriptome sequencing. Virology, 433 (1). pp. 55-63. ISSN 0042-6822