• Login

Article

McIvor, Emma and Coombes, Stephen and Thul, Ruediger (2018) Three-dimensional spatio-temporal modelling of store operated Ca2+ entry: insights into ER refilling and the spatial signature of Ca2+ signals. Cell Calcium, 73 . pp. 11-24. ISSN 1532-1991

Falcke, Martin and Moein, Mahsa and Tilunaite, Agne and Thul, Ruediger and Skupin, Alexander (2018) On the phase space structure of IP3 induced Ca2+ signalling and concepts for predictive modeling. Chaos, 28 (4). 045115/1-045115/9. ISSN 1054-1500

Coombes, Stephen and Lai, Yi Ming and Sayli, Mustafa and Thul, Ruediger (2018) Networks of piecewise linear neural mass models. European Journal of Applied Mathematics . ISSN 1469-4425

Tilunaite, Agne and Croft, Wayne and Russell, Noah A. and Bellamy, Tomas C. and Thul, Ruediger (2017) A Bayesian approach to modelling heterogeneous calcium responses in cell populations. PLoS Computational Biology, 13 (10). e1005794.. ISSN 1553-734X

Braun, Wilhelm and Thul, Ruediger and Longtin, André (2017) Evolution of moments and correlations in non-renewal escape-time processes. Physical Review E, 95 . 052127. ISSN 1550-2376

Braun, Wilhelm and Thul, Ruediger (2017) Sign changes as a universal concept in first-passage-time calculations. Physical Review E, 95 (012114). pp. 1-7. ISSN 2470-0053

Coombes, Stephen and Thul, Ruediger (2016) Synchrony in networks of coupled non-smooth dynamical systems: extending the master stability function. European Journal of Applied Mathematics . pp. 1-19. ISSN 1469-4425

Thul, Ruediger and Coombes, Stephen and Laing, Carlo R. (2016) Neural field models with threshold noise. Journal of Mathematical Neuroscience, 6 . 3/1-3/26. ISSN 2190-8567

Thul, Ruediger and Rietdorf, K. and Bootman, Martin D. and Coombes, Stephen (2015) Unifying principles of calcium wave propagation: insights from a three-dimensional model for atrial myocytes. BBA Molecular Cell Research, 1853 (9). pp. 2131-2143. ISSN 0167-4889

Braun, Wilhelm and Matthews, Paul C. and Thul, Ruediger (2015) First passage times in integrate-and-fire neurons with stochastic thresholds. Physical Review E, 91 . 052701/1-052701/7. ISSN 1539-3755

Barrack, Duncan and Thul, Ruediger and Owen, Markus R. (2015) Modelling cell cycle synchronisation in networks of coupled radial glial cells. Journal of Theoretical Biology, 377 . pp. 85-97. ISSN 1095-8541

Zachariou, Margarita and Thul, Ruediger (2014) Cannabinoid-mediated short-term plasticity in hippocampus. Journal of Computational Neuroscience, 37 (3). pp. 533-547. ISSN 1573-6873

Thul, Ruediger (2014) Oscillations in a point models of the intracellular Ca2+ concentration. Cold Spring Harbor Protocols . ISSN 1559-6095

Thul, Ruediger (2014) Time to blip – stochastic simulation of single channel opening. Cold Spring Harbor Protocols . ISSN 1559-6095

Thul, Ruediger (2014) Translating intracellular calcium signaling into models. Cold Spring Harbor Protocols . pp. 463-471. ISSN 1559-6095

Barrack, Duncan and Thul, Ruediger and Owen, Markus R. (2014) Modelling the coupling between intracellular calcium release and the cell cycle during cortical brain development. Journal of Theoretical Biology, 347 . pp. 17-32. ISSN 1095-8541

Wedgwood, Kyle C.A. and Lin, Kevin K. and Thul, Ruediger and Coombes, Stephen (2013) Phase-amplitude descriptions of neural oscillator models. Journal of Mathematical Neuroscience, 3 (2). ISSN 2190-8567

Coombes, Stephen and Thul, Ruediger and Wedgwood, Kyle C.A. (2012) Nonsmooth dynamics in spiking neuron models. Physica D, 241 (22). pp. 2042-2057. ISSN 0167-2789

Coombes, Stephen and Thul, Ruediger and Laudanski, Jonathan and Palmer, Alan and Sumner, Chris (2012) Neuronal spike-train responses in the presence of threshold noise. Frontiers in Life Science, 5 (3-4). pp. 91-105. ISSN 2155-3769

Thul, Ruediger and Coombes, Stephen and Bootman, Martin D. (2012) Persistence of pro-arrhythmic spatio-temporal calcium patterns in atrial myocytes: a computational study of ping waves. Frontiers in Physiology, 3 . p. 279. ISSN 1664-042X

Thul, Ruediger and Coombes, Stephen and Roderick, H. Llewelyn and Bootman, Martin D. (2012) Subcellular calcium dynamics in a whole-cell model of an atrial myocyte. Proceedings of the National Academy of Sciences, 109 (6). pp. 2150-2155. ISSN 1091-6490

Thurley, Kevin and Skupin, Alexander and Thul, Ruediger and Falcke, Martin (2011) Fundamental properties of Ca²⁺ signals. BBA - General Subjects, 1820 (8). pp. 1185-1194. ISSN 0304-4165

Fink, Martin and Niederer, Steven A. and Cherry, Elizabeth M. and Fenton, Flavio H. and Koivumäki, Jussi T. and Seemann, Gunnar and Thul, Ruediger and Zhang, Henggui and Sachse, Frank B. and Beard, Dan and Crampin, Edmund J. and Smith, Nicolas P. (2011) Cardiac cell modelling: observations from the heart of the cardiac physiome project. Progress in Biophysics and Molecular Biology, 104 (1-3). pp. 2-21. ISSN 0079-6107

Thul, Ruediger and Coombes, Stephen (2010) Understanding cardiac alternans: a piecewise linear modeling framework. Chaos, 20 . 045102. ISSN 1054-1500

Thul, Ruediger and Coombes, Stephen and Smith, G.D. (2009) Sensitisation waves in a bidomain fire-diffuse-fire model of intracellular Ca²⁺ dynamics. Physica D, 238 . pp. 2142-2152. ISSN 0167-2789

Thul, Ruediger and Thurley, Kevin and Falcke, Martin (2009) Towards a predictive model of Ca²⁺ puffs. Chaos, 19 . 037108. ISSN 1054-1500

Thul, Ruediger and Smith, G.D. and Coombes, Stephen (2008) A bidomain threshold model of propagating calcium waves. Journal of Mathematical Biology, 56 (4). pp. 435-463. ISSN 1432-1416

Thul, Ruediger and Falcke, Martin (2007) Waiting time distributions for clusters of complex molecules. Europhysics Letters, 79 (3). 38003-1-38003-5. ISSN 1286-4854

Thul, Ruediger and Falcke, Martin (2006) Frequency of elemental events of intracellular Ca²⁺ dynamics. Physical Review E, 73 . 061923/1-061923/14. ISSN 1539-3755

Thul, Ruediger and Falcke, Martin (2005) Reactive clusters on a membrane. Physical Biology, 2 . pp. 51-59. ISSN 1478-3967

Thul, Ruediger and Falcke, Martin (2004) Release currents of IP₃ receptor channel clusters and concentration profiles. Biophysical Journal, 86 (5). pp. 2660-2673. ISSN 0006-3495

Thul, Ruediger and Falcke, Martin (2004) Stability of membrane bound reactions. Physical Review Letters, 93 (18). p. 188103. ISSN 0031-9007

Bünemann, Jörg and Gebhard, Florian and Thul, Ruediger (2003) Landau-Gutzwiller quasi-particles. Physical Review B, 67 . 075103/1-0751103/11. ISSN 1098-0121

Book Section

Thul, Ruediger and Falcke, Martin (2007) Building oscillations bottom up: elemental time scales of intracellular calcium dynamics. In: Analysis and control of complex nonlinear processes in physics, chemistry and biology. World Scientific lecture notes in complex systems (5). World Scientific, River Edge, NJ, pp. 293-324. ISBN 9789812705839

Thul, Ruediger and Bellamy, Tom and Roderick, Llewelyn and Bootman, Martin and Coombes, Stephen (2007) Calcium oscillations. In: Cellular Oscillatory Mechanisms. Advances in experimental medicine and biology (641). Springer, New York, pp. 1-27. ISBN 9780387097930