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Cottaar, Michiel and Bastiani, Matteo and Chen, Charles and Dikranian, Krikor and Van Essen, David and Behrens, Timothy E. and Sotiropoulos, Stamatios N. and Jbabdi, Saad (2018) A gyral coordinate system predictive of fibre orientations. NeuroImage, 176 . pp. 417-430. ISSN 1095-9572

Hadida, Jonathan and Sotiropoulos, Stamatios N. and Abeysuriya, Romesh G. and Woolrich, Mark W. and Jbabdi, Saad (2018) Bayesian optimization of large-scale biophysical networks. NeuroImage, 174 . pp. 219-236. ISSN 1095-9572

Bastiani, Matteo and Andersson, Jesper L.R. and Cordero-Grande, Lucilio and Murgasova, Maria and Hutter, Jana and Price, Anthony N. and Makropoulos, Antonios and Fitzgibbon, Sean P. and Hughes, Emer J. and Rueckert, Daniel and Suresh, Victor and Rutherford, Mary and Edwards, A. David and Smith, Steve and Tournier, J. Donald and Hajnal, Joseph V. and Jbabdi, Saad and Sotiropoulos, Stamatios N. (2018) Automated processing pipeline for neonatal diffusion MRI in the developing Human Connectome Project. NeuroImage . ISSN 1095-9572

Mars, Rogier B. and Sotiropoulos, Stamatios N. and Passingham, Richard E. and Sallet, Jerome and Verhagen, Lennart and Khrapitchev, Alexandre A. and Sibson, Nicola and Jbabdi, Saad (2018) Whole brain comparative anatomy using connectivity blueprints. eLife, 7 . e35237/1-e35237/15. ISSN 2050-084X

Abeysuriya, Romesh G. and Hadida, Jonathan and Sotiropoulos, Stamatios N. and Jbabdi, Saad and Becker, Robert and Hunt, Benjamin A.E. and Brookes, Matthew J. and Woolrich, Mark W. (2018) A biophysical model of dynamic balancing of excitation and inhibition in fast oscillatory large-scale networks. PLoS Computational Biology, 14 (2). e1006007. ISSN 1553-7358

Alfaro-Almagro, Fidel and Jenkinson, Mark and Bangerter, Neal K. and Andersson, Jesper L.R. and Griffanti, Ludovica and Douaud, Gwenaëlle and Sotiropoulos, Stamatios N. and Jbabdi, Saad and Hernandez-Fernandez, Moises and Vallee, Emmanuel and Vidaurre, Diego and Webster, Matthew and McCarthy, Paul and Rorden, Christopher and Daducci, Alessandro and Alexander, Daniel C. and Zhang, Hui and Dragonu, Iulius and Matthews, Paul M. and Miller, Karla L. and Smith, Stephen M. (2018) Image processing and Quality Control for the first 10,000 brain imaging datasets from UK Biobank. NeuroImage, 166 . pp. 400-424. ISSN 1095-9572

Bastiani, Matteo and Cottaar, Michiel and Dikranian, Krikor and Ghosh, Aurobrata and Zhang, Hui and Alexander, Daniel C. and Behrens, Timothy E. and Jbabdi, Saad and Sotiropoulos, Stamatios N. (2017) Improved tractography using asymmetric fibre orientation distributions. NeuroImage, 158 . pp. 205-218. ISSN 1095-9572

Akram, Harith and Sotiropoulos, Stamatios N. and Jbabdi, Saad and Georgiev, Dejan and Mahlknecht, Philipp and Hyam, Jonathan and Foltynie, Thomas and Limousin, Patricia and De Vita, Enrico and Jahanshahi, Marjan and Hariz, Marwan and Ashburner, John and Behrens, Timothy and Zrinzo, Ludvic (2017) Subthalamic deep brain stimulation sweet spots and hyperdirect cortical connectivity in Parkinson’s disease. NeuroImage, 158 . pp. 332-345. ISSN 1095-9572

Mollink, Jeroen and Kleinnijenhuis, Michiel and Cappellen van Walsum, Anne-Marie van and Sotiropoulos, Stamatios N. and Cottaar, Michiel and Mirfin, Christopher and Heinrich, Mattias P. and Jenkinson, Mark and Pallebage-Gamarallage, Menuka and Ansorge, Olaf and Jbabdi, Saad and Miller, Karla L. (2017) Evaluating fibre orientation dispersion in white matter: comparison of diffusion MRI, histology and polarized light imaging. NeuroImage, 157 . pp. 561-574. ISSN 1095-9572

Hutter, Jana and Tournier, J. Donald and Price, Anthony N. and Cordero-Grande, Lucilio and Hughes, Emer J. and Malik, Shaihan and Steinweg, Johannes and Bastiani, Matteo and Sotiropoulos, Stamatios N. and Jbabdi, Saad and Andersson, Jesper and Edwards, A. David and Hajnal, Joseph V. (2017) Time-efficient and flexible design of optimized multishell HARDI diffusion. Magnetic Resonance in Medicine . ISSN 1522-2594

Miller, Karla L. and Alfaro-Almagro, Fidel and Bangerter, Neal K. and Thomas, David L. and Yacoub, Essa and Xu, Junqian and Bartsch, Andreas J. and Jbabdi, Saad and Sotiropoulos, Stamatios N. and Andersson, Jesper L.R. and Griffanti, Ludovica and Douaud, Gwenaëlle and Okell, Thomas W. and Weale, Peter and Dragonu, Iulius and Garratt, Steve and Hudson, Sarah and Collins, Rory and Jenkinson, Mark and Matthews, Paul M. and Smith, Stephen M. (2016) Multimodal population brain imaging in the UK Biobank prospective epidemiological study. Nature Neuroscience, 19 (11). pp. 1523-1536. ISSN 1546-1726

Sotiropoulos, Stamatios N. and Hernández-Fernández, Moisés and Vu, An T. and Andersson, Jesper L. and Moeller, Steen and Yacoub, Essa and Lenglet, Christophe and Ugurbil, Kamil and Behrens, Timothy E.J. and Jbabdi, Saad (2016) Fusion in diffusion MRI for improved fibre orientation estimation: an application to the 3T and 7T data of the Human Connectome Project. NeuroImage, 134 . pp. 396-409. ISSN 1095-9572

Donahue, Chad J. and Sotiropoulos, Stamatios N. and Jbabdi, Saad and Hernandez-Fernandez, Moises and Behrens, Timothy E. and Dyrby, Tim B. and Coalson, Timothy and Kennedy, Henry and Knoblauch, Kenneth and Van Essen, David C. and Glasser, Matthew F. (2016) Using diffusion tractography to predict cortical connection strength and distance: a quantitative comparison with tracers in the monkey. Journal of Neuroscience, 36 (25). pp. 6758-6770. ISSN 1529-2401

Jbabdi, Saad and Sotiropoulos, Stamatios N. and Haber, Suzanne N. and Van Essen, David C. and Behrens, Timothy E. (2015) Measuring macroscopic brain connections in vivo. Nature Neuroscience, 18 (11). pp. 1546-1555. ISSN 1546-1726

Kochunov, Peter and Jahanshad, Neda and Marcus, Daniel and Winkler, Anderson and Sprooten, Emma and Nichols, Thomas E. and Wright, Susan N. and Hong, L. Elliot and Patel, Binish and Behrens, Timothy and Jbabdi, Saad and Andersson, Jesper and Lenglet, Christophe and Yacoub, Essa and Moeller, Steen and Auerbach, Eddie and Ugurbil, Kamil and Sotiropoulos, Stamatios N. and Brouwer, Rachel M. and Landman, Bennett and Lemaitre, Hervé and den Braber, Anouk and Zwiers, Marcel P. and Ritchie, Stuart and van Hulzen, Kimm and Almasy, Laura and Curran, Joanne and deZubicaray, Greig I. and Duggirala, Ravi and Fox, Peter and Martin, Nicholas G. and McMahon, Katie L. and Mitchell, Braxton and Olvera, Rene L. and Peterson, Charles and Starr, John and Sussmann, Jessika and Wardlaw, Joanna and Wright, Margie and Boomsma, Dorret I. and Kahn, Rene and de Geus, Eco J.C. and Williamson, Douglas E. and Hariri, Ahmad and van 't Ent, Dennis and Bastin, Mark E. and McIntosh, Andrew and Deary, Ian J. and Hulshoff pol, Hilleke E. and Blangero, John and Thompson, Paul M. and Glahn, David C. and Van Essen, David C. (2015) Heritability of fractional anisotropy in human white matter: a comparison of Human Connectome Project and ENIGMA-DTI data. NeuroImage, 111 . pp. 300-311. ISSN 1053-8119

Sotiropoulos, Stamatios N. and Jbabdi, Saad and Xu, Junqian and Andersson, Jesper L. and Moeller, Steen and Auerbach, Edward J. and Glasser, Matthew F. and Hernandez, Moises and Sapiro, Guillermo and Jenkinson, Mark and Feinberg, David A. and Yacoub, Essa and Lenglet, Christophe and Van Essen, David C. and Ugurbil, Kamil and Behrens, Timothy E.J. (2013) Advances in diffusion MRI acquisition and processing in the Human Connectome Project. NeuroImage, 80 . pp. 125-143. ISSN 1053-8119

Glasser, Matthew F. and Sotiropoulos, Stamatios N. and Wilson, J. Anthony and Coalson, Timothy S. and Fischl, Bruce and Andersson, Jesper L. and Xu, Junqian and Jbabdi, Saad and Webster, Matthew and Polimeni, Jonathan R. and Van Essen, David C. and Jenkinson, Mark (2013) The minimal preprocessing pipelines for the Human Connectome Project. NeuroImage, 80 . pp. 105-124. ISSN 1053-8119

Jbabdi, Saad and Sotiropoulos, Stamatios N. and Behrens, Timothy E. (2013) The topographic connectome. Current Opinion in Neurobiology, 23 (2). pp. 207-215. ISSN 0959-4388

Hernández, Moisés and Guerrero, Ginés D. and Cecilia, José M. and García, José M. and Inuggi, Alberto and Jbabdi, Saad and Behrens, Timothy E. J. and Sotiropoulos, Stamatios N. (2013) Accelerating fibre orientation estimation from diffusion weighted magnetic resonance imaging using GPUs. PLoS ONE, 8 (4). e61892. ISSN 1932-6203

Jbabdi, Saad and Sotiropoulos, Stamatios N. and Savio, Alexander M. and Graña, Manuel and Behrens, Timothy E.J. (2012) Model-based analysis of multishell diffusion MR data for tractography: how to get over fitting problems. Magnetic Resonance in Medicine, 68 (6). pp. 1846-1855. ISSN 1522-2594

Sotiropoulos, Stamatios N. and Behrens, Timothy E.J. and Jbabdi, Saad (2012) Ball and rackets: inferring fiber fanning from diffusion-weighted MRI. NeuroImage, 60 (2). pp. 1412-1425. ISSN 1053-8119